Theobroma cacao Matina 1-6 v0.9
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Cacao may refer to:
Sequence Statistics
| No Sequences | 34996 |
|---|---|
| No Amino Acids | 14448078 |
| Min Seq. Length | 1 |
| Avg. Seq. Length | 412.849 |
| Max Seq. Length | 5470 |
| Seq. Length 1σ | 335.457 |
Disorder Prediction Statistics
| Predictor | % Genome Disordered | % Genome Disordered in SCOP Domains | Avg. % of Seq. Disordered | Avg. % of Disordered Regions in SCOP Domains | Avg. % of Seq. Disordered and in SCOP Domains |
|---|---|---|---|---|---|
| VLXT | 27.511 | 6.001 | 28.338 | 23.090 | 5.487 |
| VSL2b | 33.244 | 5.642 | 35.097 | 19.977 | 5.294 |
| PrDOS | 34.984 | 4.065 | 37.640 | 14.142 | 3.782 |
| PV2 | 34.601 | 5.995 | 40.592 | 19.742 | 6.152 |
| IUPred-S | 13.734 | 0.874 | 15.496 | 9.776 | 0.992 |
| IUPred-L | 14.117 | 0.969 | 17.914 | 15.119 | 1.313 |
| Espritz-N | 23.097 | 3.326 | 23.791 | 17.718 | 3.020 |
| Espritz-X | 13.409 | 0.696 | 16.258 | 7.487 | 0.887 |
| Espritz-D | 5.652 | 0.326 | 39.014 | 5.963 | 2.919 |
SUPERFAMILY Domains
| % Amino Acids with SCOP Assignment | % Sequences with SCOP Assignment | No of Domains | No of Superfamilies | No of Families | Avg. Family Size | Avg. Domain Length | Domain Pairs | Unique Domain Architectures |
|---|---|---|---|---|---|---|---|---|
| 44 | 56 | 28934 | 960 | 814 | 30.1 | 413 | 1073 | 3712 |