Takifugu rubripes, commonly known as the Japanese puffer, Tiger puffer, or torafugu (Japanese: 虎河豚), is a pufferfish in the genus Takifugu. It is distinguished by a very small genome that has been fully sequenced because of its use as a model species and is in widespread use as a reference in genomics.

Sequence Statistics

No Sequences47841
No Amino Acids30262810
Min Seq. Length20
Avg. Seq. Length632.571
Max Seq. Length21853
Seq. Length 1σ535.703

Disorder Prediction Statistics

Predictor % Genome Disordered % Genome Disordered in SCOP Domains Avg. % of Seq. Disordered Avg. % of Disordered Regions in SCOP Domains Avg. % of Seq. Disordered and in SCOP Domains
VLXT 33.182 8.655 31.622 35.965 9.032
VSL2b 40.781 9.551 38.989 32.978 10.024
PrDOS 39.587 6.950 38.230 25.703 7.390
PV2 45.764 12.203 46.605 34.823 13.680
IUPred-S 19.527 2.000 18.465 18.985 2.246
IUPred-L 22.596 2.671 22.661 25.001 3.064
Espritz-N 30.655 5.771 28.400 29.484 5.801
Espritz-X 18.426 1.380 18.105 14.728 1.793
Espritz-D 5.007 0.317 18.392 7.979 3.115

SUPERFAMILY Domains

% Amino Acids with SCOP Assignment % Sequences with SCOP Assignment No of Domains No of Superfamilies No of Families Avg. Family Size Avg. Domain Length Domain Pairs Unique Domain Architectures
49 82 93451 1084 1212 86.2 633 1563 6473

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