D2P2

Phytophthora sojae 1.1
Eukaryota; stramenopiles; Oomycetes; Pythiales; Pythiaceae; Phytophthora

Genome Homepage NCBI Taxonomy Page SUPERFAMILY Genome Page Download FASTA

Phytophthora sojae is an oomycete and a soil-borne plant pathogen that causes stem and root rot of soybean. This is a prevalent disease in most soybean growing regions, and a major cause of crop loss. In wet conditions the pathogen produces zoospores that move in water and are attracted to soybean roots. Zoospores can attach to roots, germinate, and infect the plant tissues. Diseased roots develop lesions that may spread up the stem and eventually kill the entire plant. Phytophthora sojae also produces oospores that can remain dormant in the soil over the winter, or longer, and germinate when conditions are favourable. Oospores may also be spread by animals or machinery.

Phytophthora sojae

Sequence Statistics

No Sequences19027
No Amino Acids9485042
Min Seq. Length10
Avg. Seq. Length498.504
Max Seq. Length10590
Seq. Length 1σ445.550

Disorder Prediction Statistics

Predictor % Genome Disordered % Genome Disordered in SCOP Domains Avg. % of Seq. Disordered Avg. % of Disordered Regions in SCOP Domains Avg. % of Seq. Disordered and in SCOP Domains
VLXT 37.420 6.107 37.414 21.958 6.117
VSL2b 40.818 5.109 41.654 19.048 5.258
PrDOS 39.020 3.542 40.209 14.224 3.620
PV2 46.460 6.877 47.861 20.234 6.905
IUPred-S 20.332 1.141 21.261 10.884 1.300
IUPred-L 23.879 1.515 26.026 15.760 1.677
Espritz-N 32.045 3.815 31.336 17.944 3.577
Espritz-X 20.675 0.843 22.534 8.278 1.071
Espritz-D 8.161 0.256 28.971 4.790 2.225

SUPERFAMILY Domains

% Amino Acids with SCOP Assignment % Sequences with SCOP Assignment No of Domains No of Superfamilies No of Families Avg. Family Size Avg. Domain Length Domain Pairs Unique Domain Architectures
38 54 16145 879 652 18.4 499 1066 3149

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