Schizosaccharomyces pombe
Eukaryota; Fungi; Ascomycota; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Schizosaccharomyces pombe, also called "fission yeast", is a species of yeast used in traditional brewing and as a model organism in molecular and cell biology. It is a unicellular eukaryote, whose cells are rod-shaped. Cells typically measure 3 to 4 micrometres in diameter and 7 to 14 micrometres in length. Its genome, which is approximately 14.1 million base pairs, is estimated to contain 4,970 protein-coding genes and at least 450 non-coding RNAs.
Sequence Statistics
| No Sequences | 5035 |
|---|---|
| No Amino Acids | 2368592 |
| Min Seq. Length | 24 |
| Avg. Seq. Length | 470.425 |
| Max Seq. Length | 4924 |
| Seq. Length 1σ | 371.480 |
Disorder Prediction Statistics
| Predictor | % Genome Disordered | % Genome Disordered in SCOP Domains | Avg. % of Seq. Disordered | Avg. % of Disordered Regions in SCOP Domains | Avg. % of Seq. Disordered and in SCOP Domains |
|---|---|---|---|---|---|
| VLXT | 26.955 | 7.094 | 27.941 | 32.212 | 7.816 |
| VSL2b | 34.019 | 6.743 | 34.858 | 28.015 | 7.479 |
| PrDOS | 34.755 | 5.294 | 34.926 | 22.261 | 5.581 |
| PV2 | 37.312 | 7.856 | 39.331 | 28.601 | 8.509 |
| IUPred-S | 14.490 | 1.223 | 15.608 | 14.376 | 1.670 |
| IUPred-L | 15.794 | 1.462 | 19.090 | 22.372 | 2.189 |
| Espritz-N | 23.076 | 3.845 | 22.853 | 24.619 | 3.977 |
| Espritz-X | 14.919 | 1.028 | 16.389 | 11.340 | 1.423 |
| Espritz-D | 5.587 | 0.503 | 27.398 | 10.030 | 4.854 |
SUPERFAMILY Domains
| % Amino Acids with SCOP Assignment | % Sequences with SCOP Assignment | No of Domains | No of Superfamilies | No of Families | Avg. Family Size | Avg. Domain Length | Domain Pairs | Unique Domain Architectures |
|---|---|---|---|---|---|---|---|---|
| 45 | 67 | 5024 | 777 | 590 | 6.5 | 470 | 554 | 1561 |