Caenorhabditis elegans 63_220
Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Caenorhabditis elegans (/ˌsiːnoʊræbˈdaɪtəs ˈɛləɡæns/) is a free-living transparent nematode about 1 mm in length that lives in temperate soil environments. It is the type species of its genus. The name is a blend of the Greek caeno- (recent), rhabditis (rod-like) and Latin elegans (elegant). In 1900, Maupas initially named it Rhabditides elegans. Osche placed it in the subgenus Caenorhabditis in 1952, and in 1955, Dougherty raised Caenorhabditis to the status of genus.
Sequence Statistics
| No Sequences | 29872 |
|---|---|
| No Amino Acids | 13108422 |
| Min Seq. Length | 13 |
| Avg. Seq. Length | 438.820 |
| Max Seq. Length | 18562 |
| Seq. Length 1σ | 478.992 |
Disorder Prediction Statistics
| Predictor | % Genome Disordered | % Genome Disordered in SCOP Domains | Avg. % of Seq. Disordered | Avg. % of Disordered Regions in SCOP Domains | Avg. % of Seq. Disordered and in SCOP Domains |
|---|---|---|---|---|---|
| VLXT | 30.421 | 6.326 | 29.161 | 25.225 | 5.858 |
| VSL2b | 38.094 | 6.496 | 37.063 | 22.398 | 6.013 |
| PrDOS | 37.527 | 5.064 | 37.425 | 17.997 | 4.774 |
| PV2 | 44.822 | 9.227 | 45.953 | 24.113 | 8.804 |
| IUPred-S | 18.490 | 1.458 | 18.031 | 11.152 | 1.363 |
| IUPred-L | 21.146 | 2.002 | 23.858 | 18.163 | 2.117 |
| Espritz-N | 27.245 | 3.855 | 25.503 | 19.628 | 3.354 |
| Espritz-X | 16.945 | 0.973 | 17.962 | 8.786 | 1.184 |
| Espritz-D | 7.342 | 0.447 | 32.920 | 7.631 | 3.755 |
SUPERFAMILY Domains
| % Amino Acids with SCOP Assignment | % Sequences with SCOP Assignment | No of Domains | No of Superfamilies | No of Families | Avg. Family Size | Avg. Domain Length | Domain Pairs | Unique Domain Architectures |
|---|---|---|---|---|---|---|---|---|
| 40 | 54 | 29666 | 944 | 788 | 31.4 | 448 | 979 | 3358 |