Meloidogyne hapla
Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Meloidogynidae; Meloidogyninae; Meloidogyne
Northern root-knot nematode (Meloidogyne hapla) is a species of vegetable pathogens which produces tiny galls on around 550 crop and weed species. They invade root tissue after birth. Females are able to lay up to 1,000 eggs at a time in a large egg mass. By surviving harsh winters, they can survive in cold climates (hence, the name, Northern).
Sequence Statistics
| No Sequences | 13072 |
|---|---|
| No Amino Acids | 4048107 |
| Min Seq. Length | 8 |
| Avg. Seq. Length | 309.678 |
| Max Seq. Length | 5473 |
| Seq. Length 1σ | 277.290 |
Disorder Prediction Statistics
| Predictor | % Genome Disordered | % Genome Disordered in SCOP Domains | Avg. % of Seq. Disordered | Avg. % of Disordered Regions in SCOP Domains | Avg. % of Seq. Disordered and in SCOP Domains |
|---|---|---|---|---|---|
| VLXT | 29.097 | 4.338 | 28.768 | 16.239 | 3.767 |
| VSL2b | 42.666 | 4.602 | 42.222 | 13.763 | 4.051 |
| PrDOS | 0.012 | 0.007 | 26.776 | 54.496 | 14.461 |
| PV2 | 44.441 | 5.666 | 46.851 | 15.034 | 5.224 |
| IUPred-S | 19.278 | 0.864 | 19.643 | 6.828 | 0.857 |
| IUPred-L | 21.123 | 1.051 | 25.659 | 10.282 | 1.227 |
| Espritz-N | 27.576 | 2.607 | 26.466 | 12.171 | 2.160 |
| Espritz-X | 18.556 | 0.690 | 19.974 | 5.796 | 0.800 |
| Espritz-D | 9.198 | 0.454 | 42.718 | 5.444 | 2.996 |
SUPERFAMILY Domains
| % Amino Acids with SCOP Assignment | % Sequences with SCOP Assignment | No of Domains | No of Superfamilies | No of Families | Avg. Family Size | Avg. Domain Length | Domain Pairs | Unique Domain Architectures |
|---|---|---|---|---|---|---|---|---|
| 32 | 40 | 7324 | 798 | 553 | 9.2 | 310 | 631 | 2093 |