D2P2

Callithrix jacchus 63_321
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix

Genome Homepage NCBI Taxonomy Page SUPERFAMILY Genome Page Download FASTA

The common marmoset (Callithrix jacchus), also called white-tufted marmoset or white-tufted-ear marmoset, is a New World monkey. It originally lived on the northeastern coast of Brazil, in the states of Piauí, Paraíba, Ceará, Rio Grande do Norte, Pernambuco, Alagoas, and Bahia. Through release (both intentional and unintentional) of captive individuals, it has expanded its range since the 1920s to Southeast Brazil (its first sighting in the wild for Rio de Janeiro was in 1929), where it became an invasive species, raising concerns about genetic pollution of similar species, such as the buffy-tufted marmoset (Callithrix aurita), and predation upon bird nestlings and eggs.

Common Marmoset

Sequence Statistics

No Sequences43792
No Amino Acids22286803
Min Seq. Length1
Avg. Seq. Length508.924
Max Seq. Length34990
Seq. Length 1σ486.809

Disorder Prediction Statistics

Predictor % Genome Disordered % Genome Disordered in SCOP Domains Avg. % of Seq. Disordered Avg. % of Disordered Regions in SCOP Domains Avg. % of Seq. Disordered and in SCOP Domains
VLXT 35.689 7.644 34.700 29.909 8.027
VSL2b 45.289 8.955 43.956 28.177 9.428
PrDOS 42.329 5.866 41.478 21.499 6.246
PV2 48.440 10.731 50.499 29.314 11.957
IUPred-S 22.330 1.873 21.931 15.994 2.214
IUPred-L 25.824 2.449 26.630 20.807 2.953
Espritz-N 33.886 5.302 31.890 24.395 5.292
Espritz-X 21.582 1.440 22.419 13.004 1.928
Espritz-D 8.892 0.545 28.596 8.433 4.070

SUPERFAMILY Domains

% Amino Acids with SCOP Assignment % Sequences with SCOP Assignment No of Domains No of Superfamilies No of Families Avg. Family Size Avg. Domain Length Domain Pairs Unique Domain Architectures
44 71 65350 1097 1338 59.6 509 1594 6489

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