Northern root-knot nematode (Meloidogyne hapla) is a species of vegetable pathogens which produces tiny galls (a sore caused by friction and abrasion) on around 550 crop and weed species. They invade root tissue after birth. Females are able to lay up to 1,000 eggs at a time in a large egg mass. By surviving harsh winters, they can survive in cold climates (hence, the name, Northern).

Sequence Statistics

No Sequences13072
No Amino Acids4048107
Min Seq. Length8
Avg. Seq. Length309.678
Max Seq. Length5473
Seq. Length 1σ277.290

Disorder Prediction Statistics

Predictor % Genome Disordered % Genome Disordered in SCOP Domains Avg. % of Seq. Disordered Avg. % of Disordered Regions in SCOP Domains Avg. % of Seq. Disordered and in SCOP Domains
VLXT 29.097 4.338 28.768 16.239 3.767
VSL2b 42.666 4.602 42.222 13.763 4.051
PrDOS 0.012 0.007 26.776 54.496 14.461
PV2 44.441 5.666 46.851 15.034 5.224
IUPred-S 19.278 0.864 19.643 6.828 0.857
IUPred-L 21.123 1.051 25.659 10.282 1.227
Espritz-N 27.576 2.607 26.466 12.171 2.160
Espritz-X 18.556 0.690 19.974 5.796 0.800
Espritz-D 9.198 0.454 42.718 5.444 2.996

SUPERFAMILY Domains

% Amino Acids with SCOP Assignment % Sequences with SCOP Assignment No of Domains No of Superfamilies No of Families Avg. Family Size Avg. Domain Length Domain Pairs Unique Domain Architectures
32 40 7324 798 553 9.2 310 631 2093

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